DNA barcoding of Andaliman (Zanthoxylum acanthopodium DC) from North Sumatra Province of Indonesia using maturase K Gene

Suriani, Cicik and Prasetya, Eko and Harsono, Tri and Manurung, Johannes and Prakasa, Hary and Handayani, Dina and Jannah, Miftahul and Rachmawati, Yuanita (2021) DNA barcoding of Andaliman (Zanthoxylum acanthopodium DC) from North Sumatra Province of Indonesia using maturase K Gene. Tropical Life Sciences Research, 32 (2). pp. 15-28. ISSN 1985-3718; 2180-4249

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Abstract

Andaliman (Zanthoxylum acanthopodium DC) is a native plant of North Sumatra province. Zanthoxylum acanthopodium is a member of Rutaceae family widely found in northern Sumatra, Indonesia. The aim of this study was to barcode Z. acanthopodium in North Sumatra province, Indonesia based on cpDNA maturase K (matK). Samples were collected in seven localities across six regions of North Sumatra province. Phylogenetic analysis was conducted using Maximum Likelihood method. The results of phylogenetic analysis indicate that Z. acanthopodium is a monophyletic group that is derived from a common ancestor. The results of the phylogenetic tree construction show that there is a grouping of accession between Z. acanthopodium species separate from other species in the Zanthoxylum genus as well as those of the Rutaceae family. The results showed that cpDNA matK marker can effectively be used as DNA barcoding to identify Z. acanthopodium.

Item Type: Article
Creators:
Creators
Email
NIDN
Suriani, Cicik
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Prasetya, Eko
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Harsono, Tri
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Manurung, Johannes
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Prakasa, Hary
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Handayani, Dina
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Jannah, Miftahul
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Rachmawati, Yuanita
yuanitarhartono@gmail.com
2019088803
Uncontrolled Keywords: Z. acanthopodium; Maturase K; North Sumatra; DNA Barcoding
Subjects: 06 BIOLOGICAL SCIENCES > 0603 Evolutionary Biology > 060305 Evolution of Developmental Systems
06 BIOLOGICAL SCIENCES > 0604 Genetics > 060406 Genetic Immunology
Divisions: Fakultas Tarbiyah dan Keguruan > Pendidikan Ilmu Pengetahuan Alam
Depositing User: Samidah Nurmayuni
Date Deposited: 25 Mar 2022 07:01
Last Modified: 25 Mar 2022 07:01
URI: http://repository.uinsby.ac.id/id/eprint/2240

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